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OPMNCTL Missing after clone

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Find the server timeout and increase the value in the context file 
grep s_adminservertimeout $CONTEXT_FILE 
##Set to 4000
vi $CONTEXT_FILE 
/s_adminservertimeout
adautocfg.sh
Create the missing domain 
$FND_TOP/bin/txkrun.pl -script=ChkEBSDependecies -server=ALL_SERVERS
cd $FND_TOP/patch/115/bin
ps -uapplyes
## Make sure no processes are running
echo $CONTEXT_FILE
perl txkEBSDomainConfig.pl
Remove node if its there from PROD clone 
sqlplus apps/$APPS_PASS
select node_name from ADOP_VALID_NODES;
dELETE FROM ADOP_VALID_NODES WHERE EXISTS ( select node_name from ADOP_VALID_NODES where node_name='prodserver' );
commit;
exit;
Run autoconfig and start the application tier 
adautocfg.sh 
adstrtal.sh apps/$APPS_PASS
## After R12.2.4 Upgrade Found OPMNCTL Missing While Starting Services (Doc ID 1953456.1)

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